Plant GARDEN How To ▶︎

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Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908282.1_cds_XP_016458391.1_52022

CDS Infomation

[gene=LOC107782076] [db_xref=GeneID:107782076] [protein=9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic-like] [protein_id=XP_016458391.1] [location=complement(38766..40547)] [gbkey=CDS]

Sequence

ATGCATACAATCTTACCAAACCCTTCTCTTCACAAACCCCACAATTCTCCTTCTTTTTCT
TGTAAAATTCTCATTAATCCTTCTAAGAAAAATACTATAACACTTCCTAGAAGACATACT
CCACCGTTTCTACCACCGCTGCTGCCACCGTCATCGTCACCGCCACCGTCACCGCCACCT
TTGGCTGAACCTAAAATATTTCCATTAAAATTTGAACCTCCAAAATTGAACCCTCTTCAG
AAACTTGCATCTTTAGCCTTGGACATGTTAGAAAAATCTGTGGTAACAGAGCTGGAAAAG
AAACATAAGCTGAACCGGACAGTTGACCCGGAAATTCAGCTAGAAGGGAATTTTGCACCG
GTTCAAGAATGCCCGGTTCAGCATGGGCTTGAGGTAATTGGTCAAATTCCATCTACTTTA
ACGGGGGTTTACGTTAGAAATGGTGCTAACCCATTATTTGAACCGATTAACGGTCATCAT
TTATTTGACGGTGACGGAATGATTCATGCCGTTAAATTGGATTCAGTTAATAATAAAGCT
AGCTACTCATGCCGGTTCATTCAAACAAGCCGGTTGGTTCAAGAAGCTGCATTGGGCCGA
CCGGTTTTTCCTAAACCGATAGGCGAGTTGCATGGCCATTTGGGGTTGGCTCGGCTTTTA
CTGTTCTTTGCCCGAACTAGGTTCGGGTTGGTAGATGCTACCAAAGGAACCGGCGTGGCA
AACGCCGGTTTGGTTTATTTTAACGGCCGGCTTTTAGCTATGTCGGAGGATGATCTTCCG
TATAGCGTCCGTATTACAGATGACGGTGATCTTGAAACTAACGGACGTTACAATTTTGAC
GGACAAATTGATGATCCATTGATTGCACATCCTAAGGTAGACCCCATCACAGGGGAACTT
TATACTTTGAGTTACAATGTATTGAAAAAACCTTACCTTAAATTCTTCAAATTTGACACG
TGCGGTAATAAGTCACGTGACATTTCTATTTCCCTCCAAAATCCAACCATGATTCATGAC
TTTGCCATCACGGAAAATCACGTGATCATTCCGGATTATCAGGTGGTATTCAAGTTATCC
GAGATGTTACGGGGCGGGTCGCCCGTAATCCATGACCCGGAAAAAGTTTCTAGGTTCGGC
GTGTTGTCGAAAGACGACCACGACGAATCAAGAATTCGATGGATTGAAGTTCCAAATTGC
TTTTGCATGCATTTATGGAATGCATGGGAGGAGATAAACGAAGACGACGATGAAACCCTA
GTGATTATAGGGTCATGCATGAGTCCACCGGACTCCATTTTTTCAGGAAGTGATGAATCA
TTAAAAAGTGAACTATCCGAGATCCGATTAAACTTGAAAACGGGCAAGTCGACCCGACGG
GTTATAGTATCGGGTATGAACCTAGAAGCGGGGCAAGTCAACAAGAATAAACTTGGTCGA
AAAACTCGGTATGCATTCATGGCAATAGCTGATCCATGGCCAAAATGTAGTGGCCTAGCA
AAAGTCGATTTGGTCACGGGAAATGTTACAAAAGTTTTATATGGAGATGAAAAATTTGGA
GGCGAACCCTATTTCGTGCCGAGCACGAAAGAAGGTAAAGAAGATGAAGGGTATCTTATG
AGTTATGTTAGAGATGAGATGAAAGAAAAATCAGAATTAGTTATAGTTAATGCTTCAAAT
ATGAAGCAAGTGGCCTTAGTAAAATTACCTAAAAGAGTGCCATATGGTTTTCATGGTACA
TTCGTTAGTTCACAAGATATATGTAATCAATCTTCTTGTTAA

Peptide Sequence

PEP ID

XP_016458391.1

PEP Infomation

PREDICTED: 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic-like [Nicotiana tabacum]

Sequence

MHTILPNPSLHKPHNSPSFSCKILINPSKKNTITLPRRHTPPFLPPLLPPSSSPPPSPPP
LAEPKIFPLKFEPPKLNPLQKLASLALDMLEKSVVTELEKKHKLNRTVDPEIQLEGNFAP
VQECPVQHGLEVIGQIPSTLTGVYVRNGANPLFEPINGHHLFDGDGMIHAVKLDSVNNKA
SYSCRFIQTSRLVQEAALGRPVFPKPIGELHGHLGLARLLLFFARTRFGLVDATKGTGVA
NAGLVYFNGRLLAMSEDDLPYSVRITDDGDLETNGRYNFDGQIDDPLIAHPKVDPITGEL
YTLSYNVLKKPYLKFFKFDTCGNKSRDISISLQNPTMIHDFAITENHVIIPDYQVVFKLS
EMLRGGSPVIHDPEKVSRFGVLSKDDHDESRIRWIEVPNCFCMHLWNAWEEINEDDDETL
VIIGSCMSPPDSIFSGSDESLKSELSEIRLNLKTGKSTRRVIVSGMNLEAGQVNKNKLGR
KTRYAFMAIADPWPKCSGLAKVDLVTGNVTKVLYGDEKFGGEPYFVPSTKEGKEDEGYLM
SYVRDEMKEKSELVIVNASNMKQVALVKLPKRVPYGFHGTFVSSQDICNQSSC

Transcript Sequence

Gene sequence data has not been registered.